FEDERAL STATE BUDGETARY INSTITUTION
NATIONAL MEDICAL RESEARCH CENTER OF OBSTETRICS, GYNECOLOGY OF PERINATOLOGY

the name of Academician V.I. Kulakov
Ministry of Health of the Russian Federation

Various plugins for data processing for ION Torrent Suite

Our laboratory closely cooperates with the Center's genetic methods department, which is equipped with several sequencing devices of the new generation (NGS) running the IonTorrent Suite system. The tasks of processing the results of the sequence are beyond the scope of the control system, the results of the sequencer require further analysis, transfer, storage and integration with other systems.

All these tasks are solved with the help of plugins for the IonTorrent Suite system, which automatically start after the end of the sequencing. Those plug-ins allow to automate many processes in the laboratory and speed up the delivery of the final results.


Stack:

  • Python
  • R